Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs13273001 chr8:50160443 G/A 2.69E-10 118 46.27 50.82 25.83 KM Plot
THYM rs13273332 chr8:50226927 A/G 1.71E-10 119 46.43 49.75 25.83 KM Plot
THYM rs13275747 chr8:50140559 C/T 2.69E-10 118 46.27 50.82 25.83 KM Plot
THYM rs13282557 chr8:50131622 T/C 6.67E-11 118 46.43 49.75 24.87 KM Plot
THYM rs13315549 chr3:118917422 G/A 1.0E-12 117 45.87 33.85 3.83 KM Plot
THYM rs13320556 chr3:118913677 T/A 5.88E-13 117 44.38 35 3.83 KM Plot
THYM rs13331207 chr16:77756147 A/C 0.000103 116 45.87 29.95 28.43 KM Plot
THYM rs13332296 chr16:77756146 T/C 0.000103 116 45.87 29.95 28.43 KM Plot
THYM rs13379548 chr15:71902665 T/C 0.000184 115 35.33 48 21 KM Plot
THYM rs13383939 chr2:30842901 G/A 2.07E-8 117 38.58 42.9 33.13 KM Plot
THYM rs13388031 chr2:30806299 C/T 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs13388156 chr2:30773564 G/A 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs13388701 chr2:30824563 G/T 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs13389142 chr2:30824924 G/A 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs13390344 chr2:30725010 G/A 1.4E-8 118 37.37 50.1 33.13 KM Plot